[−] List of all items
Structs
- DnaBytes
- DnaSlice
- Exts
- KmerExtsIter
- KmerIter
- MerIter
- clean_graph::CleanGraph
- compression::ScmapCompress
- compression::SimpleCompress
- dna_string::DnaString
- dna_string::DnaStringIter
- dna_string::DnaStringSlice
- dna_string::PackedDnaStringSet
- filter::CountFilter
- filter::CountFilterEqClass
- filter::CountFilterSet
- graph::BaseGraph
- graph::DebruijnGraph
- graph::Node
- graph::NodeIntoIter
- graph::NodeIter
- graph::NodeKmer
- graph::NodeKmerIter
- kmer::IntKmer
- kmer::K12
- kmer::K14
- kmer::K2
- kmer::K20
- kmer::K24
- kmer::K3
- kmer::K30
- kmer::K31
- kmer::K4
- kmer::K40
- kmer::K48
- kmer::K5
- kmer::K6
- kmer::VarIntKmer
- msp::MspInterval
- vmer::Lmer
Enums
Traits
- Kmer
- Mer
- MerImmut
- Vmer
- compression::CompressionSpec
- filter::KmerSummarizer
- kmer::IntHelp
- kmer::KmerSize
- vmer::Array
Functions
- base_to_bits
- bits_to_ascii
- bits_to_base
- complement
- compression::compress_graph
- compression::compress_kmers
- compression::compress_kmers_with_hash
- dna_only_base_to_bits
- filter::filter_kmers
- filter::remove_censored_exts
- filter::remove_censored_exts_sharded
- is_valid_base
- msp::msp_sequence
- msp::simple_scan
- test::edit_dna
- test::random_base
- test::random_contigs
- test::random_dna
- test::random_kmer
- test::random_vmer
- test::simple_random_contigs