Trait debruijn::compression::CompressionSpec

pub trait CompressionSpec<D> {
    fn reduce(&self, path_object: D, kmer_object: &D) -> D;
    fn join_test(&self, d1: &D, d2: &D) -> bool;
}

Customize the path-compression process. Implementing this trait lets the user control how the per-kmer data (of type D) is summarized into a per-path summary data (of type DS). It also let's the user introduce new breaks into paths by inspecting in the per-kmer data of a proposed with join_test_kmer function.

Required methods

fn reduce(&self, path_object: D, kmer_object: &D) -> D

fn join_test(&self, d1: &D, d2: &D) -> bool

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Implementors

impl<D, F> CompressionSpec<D> for SimpleCompress<D, F> where
    F: Fn(D, &'r D) -> D, 

fn reduce(&self, d: D, other: &D) -> D

fn join_test(&self, _: &D, _: &D) -> bool

impl<D: PartialEq> CompressionSpec<D> for ScmapCompress<D> where
    D: Debug, 

fn reduce(&self, d: D, other: &D) -> D

fn join_test(&self, d1: &D, d2: &D) -> bool

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